miRBase entry: mmu-mir-6982

Stem-loop mmu-mir-6982


Accession
MI0022830
Symbol
MGI: Mir6982
Description
Mus musculus mmu-mir-6982 precursor miRNA

Literature search
1 open access papers mention mmu-mir-6982
(1 sentences)

Sequence

7 reads, 2 reads per million, 5 experiments
aggggCUGGAGGAUCGCAGGGGUGGCCUGGggcaggcuaggcaaaccUGGCCCCUCUGCCCCUUCCAG
((((((.(((((..(.((((....((((((......))))))...)))))..))))))))))).....

Structure
-----      U     AU G    GGUG      gg 
     aggggC GGAGG  C CAGG    GCCUGG  c
     |||||| |||||  | ||||    ||||||   
     UCCCCG UCUCC  G GUcc    cggauc  a
GACCU      -     CC -    -aaa      gg 


Annotation confidence Not enough data
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Genome context
chr18: 60958073-60958140 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-6982
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-6982-5p

Accession MIMAT0027866
Description Mus musculus mmu-miR-6982-5p mature miRNA
Sequence 6 - CUGGAGGAUCGCAGGGGUGGCCUGG - 30
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6982-3p

Accession MIMAT0027867
Description Mus musculus mmu-miR-6982-3p mature miRNA
Sequence 48 - UGGCCCCUCUGCCCCUUCCAG - 68
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645