miRBase entry: mmu-mir-3547

Stem-loop mmu-mir-3547


Accession
MI0022813
Symbol
MGI: Mir3547
Description
Mus musculus mmu-mir-3547 precursor miRNA


Sequence

620 reads, 20 reads per million, 33 experiments
GUGGGAAGAGGGGUGGGGCCCGGGAcuguacccaugugaggacuauucuugaguccugcucuuguucUGAGCACCACCCCUCUCUCAG
.(((((.(((((((((.((.((((((.........((.((((((.......))))))))....)))))).)).)))))))))))))).

Structure
G     A         G  C      uguacccau  g      au 
 UGGGA GAGGGGUGG GC CGGGAc         gu aggacu  u
 ||||| ||||||||| || ||||||         || ||||||  c
 ACUCU CUCCCCACC CG GUcuug         cg uccuga  u
G     -         A  A      -----uucu  -      gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr17: 25245551-25245638 [-]

Database links

Mature mmu-miR-3547-5p

Accession MIMAT0027832
Description Mus musculus mmu-miR-3547-5p mature miRNA
Sequence 1 - GUGGGAAGAGGGGUGGGGCCCGGGA - 25
Evidence experimental
meta-analysis [1]

Mature mmu-miR-3547-3p

Accession MIMAT0027833
Description Mus musculus mmu-miR-3547-3p mature miRNA
Sequence 68 - UGAGCACCACCCCUCUCUCAG - 88
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645