Stem-loop gga-mir-6712

Accession

MI0022534

Description

Gallus gallus gga-mir-6712 precursor miRNA

Sequence

gccagcacugugccuucccgacccAGUGGUGGCUGAGAACAGUGACcagcacugcucccucggccaucccacgagcaggaggcucuccuuccugagguugcagcauugcu
...((((..((((.....(((((..((((((((((((..(((((.....)))))....))))))))..))))...(((((((.....))))))).)))))..))))))))

Structure

gcc    cu    cuucc     ---------------------cA    --        --AA     A 
   agca  gugc     cgacc                       GUGG  UGGCUGAG    CAGUG C
   ||||  ||||     |||||                       ||||  ||||||||    ||||| c
   ucgu  uacg     guugg                       cacc  accggcuc    gucac a
---    --    ---ac     aguccuuccucucggaggacgag    cu        ccuc     g 

Annotation confidence Low

Genome context

chr17: 10000998-10001107 [-]

Mature gga-miR-6712-5p

• Accession: MIMAT0025822
• Description: Gallus gallus gga-miR-6712-5p mature miRNA
• Sequence: 25 - AGUGGUGGCUGAGAACAGUGAC - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227