Stem-loop gga-mir-6708

Accession

MI0022530

Description

Gallus gallus gga-mir-6708 precursor miRNA

Sequence

6 reads, 0 reads per million, 3 experiments

aggaugauggagcagagccUAUGGGAGGAGCGGUGAGCAGCAgcacagcaucagcuccugcccgcccuguccccauggcuccauccaucccagcaccgcggccgcuccac
.((..((((((...(((((.(((((.(.((.((((.((((.(((.........))).)))).)))))).).))))))))))..))))))))......((....)).....

Structure

------------------a  au      gca     U     A G  C    A    C   aca 
                   gg  gaugga   gagcc AUGGG G AG GGUG GCAG Agc   g
                   ||  ||||||   ||||| ||||| | || |||| |||| |||   c
                   cc  cuaccu   cucgg uaccc u uc ccgc cguc ucg   a
caccucgccggcgccacga  --      -ac     -     c g  -    c    c   acu 

Annotation confidence Low

Genome context

chr1: 292474-292583 [+]

Mature gga-miR-6708-5p

• Accession: MIMAT0025818
• Description: Gallus gallus gga-miR-6708-5p mature miRNA
• Sequence: 20 - UAUGGGAGGAGCGGUGAGCAGCA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227