Stem-loop gga-mir-6701

Accession

MI0022523

Description

Gallus gallus gga-mir-6701 precursor miRNA

Sequence

6 reads, 0 reads per million, 3 experiments

caaauccuuccaauaggccagaugagugaagugaucugccugcaaaguaccccgggaaacaaaaacaggAUUAUUUUACAGACAGAUCGCuuuccucagccagcucaccc
...............(((....((((.(((((((((((.(((.((((((..((.(..........).))..)))))).))).))))))))))).))))))).........

Structure

caaauccuuccaaua   caga    u           c   c      cc  g gaaa 
               ggc    ugag gaagugaucug cug aaagua  cc g    c
               |||    |||| ||||||||||| ||| ||||||  || |     
               ccg    acuc uuuCGCUAGAC GAC UUUUAU  gg c    a
------cccacucga   ----    c           A   A      UA  a aaaa 

Annotation confidence Low

Genome context

chr2: 97511155-97511264 [-]

Mature gga-miR-6701-3p

• Accession: MIMAT0025811
• Description: Gallus gallus gga-miR-6701-3p mature miRNA
• Sequence: 70 - AUUAUUUUACAGACAGAUCGC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227