Stem-loop gga-mir-6699

Accession

MI0022521

Description

Gallus gallus gga-mir-6699 precursor miRNA

Sequence

27 reads, 0 reads per million, 4 experiments

agcaagcauuggcacucuccucuugUGAAGACCUCGUGCAUUGUAGCuuugcaugcuacaauacacuagaucuuagucaaaaggaaagccaaggcacagauggaagugaa
.....((.(((((....((((.(((..((((.((.(((.((((((((.......)))))))).))).)).))))...))).))))..))))).))...............

Structure

----------agcaa  a     acuc    c   -UG    C  C   C        uu 
               gc uuggc    uccu uug   AAGA CU GUG AUUGUAGC  u
               || |||||    |||| |||   |||| || ||| ||||||||  g
               cg aaccg    agga aac   uucu ga cac uaacaucg  c
aagugaagguagaca  g     --aa    a   uga    a  u   a        ua 

Annotation confidence Low

Genome context

chr3: 67609936-67610045 [-]

Mature gga-miR-6699-5p

• Accession: MIMAT0025808
• Description: Gallus gallus gga-miR-6699-5p mature miRNA
• Sequence: 26 - UGAAGACCUCGUGCAUUGUAGC - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227