Stem-loop gga-mir-6689

Accession

MI0022510

Description

Gallus gallus gga-mir-6689 precursor miRNA

Sequence

26 reads, 1 reads per million, 2 experiments

guucuccugagccugacugcuuacagugagguucugucagagccauucugggugguuucaugcuucuggUGAUGGCGCUCGCAGAACUGCAcugacugcuuugcuucccu
((((....))))......((...(((((.((((((((.((.((((((.(.((.(((.....))).)).).)))))).)).)))))))).)))))...))...........

Structure

guucuccugagccugacu  uua     a        c  a      c g  u   u 
                  gc   cagug gguucugu ag gccauu u gg ggu u
                  ||   ||||| |||||||| || |||||| | || ||| c
                  cg   gucAC UCAAGACG UC CGGUAG g uc ucg a
-------ucccuucguuu  uca     G        C  G      U g  u   u 

Annotation confidence Low

Genome context

chr4: 3241204-3241313 [-]

Mature gga-miR-6689-3p

• Accession: MIMAT0025795
• Description: Gallus gallus gga-miR-6689-3p mature miRNA
• Sequence: 70 - UGAUGGCGCUCGCAGAACUGCA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227