Stem-loop gga-mir-6678

Accession

MI0022498

Description

Gallus gallus gga-mir-6678 precursor miRNA

Sequence

5 reads, 4 reads per million, 1 experiments

cacaaaacgauagaguucuugcuugauucuuagugaagucaggugggggccaguuaaacuucUACCUUGGACUUCUGAAGGGCAggcuuugaacucuucaggacacuggu
...........(((((((..(((((.(((((...(((((((((((((((.........)))))))))..))))))..))))))))))...)))))))((((....)))).

Structure

--cacaaaacgau       -uu     a     agu      --         cca 
             agaguuc   gcuug uucuu   gaaguc  agguggggg   g
             |||||||   ||||| |||||   ||||||  |||||||||   u
             ucucaag   cggAC GGGAA   CUUCAG  UCCAUcuuc   u
uggucacaggacu       uuu     -     -GU      GU         aaa 

Annotation confidence Not enough data

Genome context

chr3: 103172072-103172181 [+]

Mature gga-miR-6678-3p

• Accession: MIMAT0025782
• Description: Gallus gallus gga-miR-6678-3p mature miRNA
• Sequence: 63 - UACCUUGGACUUCUGAAGGGCA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227