Stem-loop gga-mir-6676

Accession

MI0022496

Description

Gallus gallus gga-mir-6676 precursor miRNA

Literature search

1 open access papers mention gga-mir-6676
(1 sentences)

Sequence

agcagggcacugggagggacugagaugcaugcagggacauugggaggggacagauugaaagcacuggGCCCAAUGAUGUCUCUGAGGGGGuccugggugugcugaggggg
..(((.(((((.((.........(((.(...(((((((((((...(((..(((..........)))..)))..)))))))))))...).))))).))))).)))......

Structure

----ag   g     g  agggacuga   g aug           gga   ga   auug 
      cag gcacu gg         gau c   cagggacauug   ggg  cag    a
      ||| ||||| ||         ||| |   |||||||||||   |||  |||     
      guc ugugg uc         cuG G   GUCUCUGUAGU   CCC  guc    a
ggggga   g     g  ---------   G GGA           -AA   Gg   acga 

Annotation confidence Low

Genome context

chr1: 907622-907731 [-]

Mature gga-miR-6676-3p

• Accession: MIMAT0025779
• Description: Gallus gallus gga-miR-6676-3p mature miRNA
• Sequence: 68 - GCCCAAUGAUGUCUCUGAGGGGG - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227