Stem-loop gga-mir-6670

Accession

MI0022490

Description

Gallus gallus gga-mir-6670 precursor miRNA

Literature search

1 open access papers mention gga-mir-6670
(1 sentences)

Sequence

gauguguuugucuugauuaGUGGAAUGAUGAUCUAUAUUCUGAGUuaauuuuucuuaguuguguagaugcguauauuucauaagguacaaagaugaguuuuucauugaau
((....((((((((..((.(((((((((((((((((((.(((((.........)))))..)))))))).))).)))))))).)).....))))))))....)).......

Structure

-------  ugug        ---ga  a        -   -        -U     Uua 
       ga    uuugucuu     uu GUGGAAUG AUG AUCUAUAU  CUGAG   a
       ||    ||||||||     || |||||||| ||| ||||||||  |||||   u
       cu    gaguagaa     ga uacuuuau ugc uagaugug  gauuc   u
uaaguua  uuuu        acaug  a        a   g        uu     uuu 

Annotation confidence Low

Genome context

chr3: 79870059-79870168 [+]

Mature gga-miR-6670-5p

• Accession: MIMAT0025772
• Description: Gallus gallus gga-miR-6670-5p mature miRNA
• Sequence: 20 - GUGGAAUGAUGAUCUAUAUUCUGAGU - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227