Stem-loop gga-mir-6669

Accession

MI0022489

Description

Gallus gallus gga-mir-6669 precursor miRNA

Sequence

14 reads, 0 reads per million, 2 experiments

agucucaucuccugggucugccgccuGGUGAUACGGGAGCAAGGCUGCAUacuugaaccuuaguucuUUGCAGCCUGGCCGUAUCUCAGgaugcuguccugcuagagg
........(((.((((.(.((..(((((.(((((((.....((((((((.....((((....))))..))))))))..))))))))))))..)).).))))...))).

Structure

agucucau   --c    u u  cg     U       GAGCA        Uacuu    c 
        cuc   uggg c gc  ccuGG GAUACGG     AGGCUGCA     gaac u
        |||   |||| | ||  ||||| |||||||     ||||||||     ||||  
        gag   gucc g cg  gGACU CUAUGCC     UCCGACGU     cuug u
-------g   auc    u u  ua     -       ---GG        ---Uu    a 

Annotation confidence Low

Genome context

chrZ: 27711424-27711531 [-]

Mature gga-miR-6669-5p

• Accession: MIMAT0025770
• Description: Gallus gallus gga-miR-6669-5p mature miRNA
• Sequence: 27 - GGUGAUACGGGAGCAAGGCUGCAU - 50
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6669-3p

• Accession: MIMAT0025771
• Description: Gallus gallus gga-miR-6669-3p mature miRNA
• Sequence: 68 - UUGCAGCCUGGCCGUAUCUCAG - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227