Stem-loop gga-mir-6668

Accession

MI0022488

Description

Gallus gallus gga-mir-6668 precursor miRNA

Sequence

2 reads, 2 reads per million, 1 experiments

ugggugauccuguuggucuuuucuaaccauggugauucaaugauucuaugauguguugccaUGGAAUCGUGGAAUAGCUUGGGUuggaaggcaccugaaugcccacccag
((((((........(((.((((((((((..(((.((((.(((((((((((.........))))))))))).)))).)))..)))))))))).)))........)))))).

Structure

-      auccuguu   c          au   g    a           aug 
 ugggug        ggu uuuucuaacc  ggu auuc augauucuaug   u
 ||||||        ||| ||||||||||  ||| |||| |||||||||||   g
 acccac        cca ggaagguUGG  UCG UAAG UGCUAAGGUac   u
g      ccguaagu   c          GU   A    G           cgu 

Annotation confidence Low

Genome context

chr4: 34288536-34288645 [+]

Mature gga-miR-6668-3p

• Accession: MIMAT0025769
• Description: Gallus gallus gga-miR-6668-3p mature miRNA
• Sequence: 62 - UGGAAUCGUGGAAUAGCUUGGGU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227