Stem-loop gga-mir-6666

Accession

MI0022486

Description

Gallus gallus gga-mir-6666 precursor miRNA

Sequence

15 reads, 0 reads per million, 3 experiments

gagagaacgggaauuuaggggacuccugcacucguucgucccugcgcugugaugcagucugcUCGGGUGAUGAGGACAGGAGGAuuccugaguuuguucuucccagcuau
..((((((..(((((((((((.((((((..(((((.((.(((.(((((((...)))))..))..))))))))))..))))))..))))))))))))))))).........

Structure

-------ga      gg           -a      ca     u  u   -u  --     g 
         gagaac  gaauuuagggg  cuccug  cucgu cg ccc  gc  gcugu  
         ||||||  |||||||||||  ||||||  ||||| || |||  ||  ||||| a
         uucuug  uuugaguccuu  GAGGAC  GAGUA GU GGG  cg  ugacg  
uaucgaccc      --           AG      AG     -  -   CU  uc     u 

Annotation confidence Low

Genome context

chr28: 4722719-4722828 [+]

Mature gga-miR-6666-3p

• Accession: MIMAT0025767
• Description: Gallus gallus gga-miR-6666-3p mature miRNA
• Sequence: 63 - UCGGGUGAUGAGGACAGGAGGA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227