Stem-loop gga-mir-6660

Accession

MI0022480

Description

Gallus gallus gga-mir-6660 precursor miRNA

Sequence

156 reads, 2 reads per million, 4 experiments

gaggagagugugcugaaaggugggcggcgguguguggugcggggcaggcgguguggggccaccgggcUCUGACAUGGCUCUGCUCCGCAGUcugcuccugcgcgcugcag
.......((.((((....)))).)).(((((((((((((((((((((((.((((((((((....)))))).)))).)).))))))))))........)))))))))))..

Structure

gaggagagugugcugaaaggugggcg           --------          -  g    -      a 
                          gcggugugugg        ugcggggcag gc gugu ggggcc c
                          |||||||||||        |||||||||| || |||| ||||||  
                          cgucgcgcguc        ACGCCUCGUC CG UACA UCUcgg c
------------------------ga           cucgucUG          U  G    G      g 

Annotation confidence Low

Genome context

chr10: 1503992-1504101 [-]

Mature gga-miR-6660-3p

• Accession: MIMAT0025761
• Description: Gallus gallus gga-miR-6660-3p mature miRNA
• Sequence: 68 - UCUGACAUGGCUCUGCUCCGCAGU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227