Stem-loop gga-mir-6659

Accession

MI0022479

Description

Gallus gallus gga-mir-6659 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

cccugucgucgagaguuauaguuaaccuuuagccgguuaugaugguggcuaaaaggugcuuccaugcucUUUGGCUGCCAUCGGACCUGGUuaaagguuaacauuuugcu
..((.((...)).)).....((((((((((((((((((.((((((((((((((.((.((......)))))))))))))))))))))).))))))))))))))........

Structure

cccugucgucgagaguuaua              -    a              a  u  uu 
                    guuaaccuuuagcc gguu ugaugguggcuaaa gg gc  c
                    |||||||||||||| |||| |||||||||||||| || ||   
                    caauuggaaauUGG CCAG GCUACCGUCGGUUU cu cg  c
------------ucguuuua              U    -              -  -  ua 

Annotation confidence Low

Genome context

chr1: 1698306-1698415 [-]

Mature gga-miR-6659-3p

• Accession: MIMAT0025760
• Description: Gallus gallus gga-miR-6659-3p mature miRNA
• Sequence: 70 - UUUGGCUGCCAUCGGACCUGGU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227