Stem-loop gga-mir-6655

Accession

MI0022475

Description

Gallus gallus gga-mir-6655 precursor miRNA

Sequence

aaauuggugcccaggugguUCUGCUAGGAGGCUGUGUAUCCUgggugccagcaggauagcagugcccuaguaguggcauuggguguccacugcaugggggucuucuccau
....((((((((((.((.(.((((((((..(((((.(((((((........))))))))))))..)))))))).).))))))))).)))....((((((.....))))))

Structure

-----------------aaau   -       g  g U        AG     G       ggu 
                     ugg ugcccag ug u CUGCUAGG  GCUGU UAUCCUg   g
                     ||| ||||||| || | ||||||||  ||||| |||||||    
                     acc guggguu ac g gaugaucc  ugacg auaggac   c
uaccucuucuggggguacguc   u       -  g u        cg     -       gac 

Annotation confidence Low

Genome context

chr3: 97164290-97164399 [+]

Mature gga-miR-6655-5p

• Accession: MIMAT0025756
• Description: Gallus gallus gga-miR-6655-5p mature miRNA
• Sequence: 20 - UCUGCUAGGAGGCUGUGUAUCCU - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227