Stem-loop gga-mir-6654

Accession

MI0022474

Description

Gallus gallus gga-mir-6654 precursor miRNA

Sequence

5 reads, 0 reads per million, 1 experiments

ucucaccucaccgccucccucugcugcuuucccugugcucagcgacggagccgcagcugugugagugcUCAGCACUGGGGCUGAGCUGGCAgggagggcagccccccauc
......................(((((((((((((((((((((..(((.((.(((.((.....)))))...)).)))..)))))))..))))))))))))))........

Structure

ucucaccucaccgccucccucu              --       ga   a  --c   g  g 
                      gcugcuuucccugu  gcucagc  cgg gc   gca cu u
                      ||||||||||||||  |||||||  ||| ||   ||| || g
                      cgacgggagggACG  CGAGUCG  GUC CG   cgu ga u
--------------cuaccccc              GU       GG   A  ACU   -  g 

Annotation confidence Low

Genome context

chr26: 2853093-2853202 [-]

Mature gga-miR-6654-3p

• Accession: MIMAT0025755
• Description: Gallus gallus gga-miR-6654-3p mature miRNA
• Sequence: 69 - UCAGCACUGGGGCUGAGCUGGCA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227