Stem-loop gga-mir-6651

Accession

MI0022470

Description

Gallus gallus gga-mir-6651 precursor miRNA

Literature search

2 open access papers mention gga-mir-6651
(5 sentences)

Sequence

21 reads, 1 reads per million, 5 experiments

agccccggugagccgaggcacACCAGGUUGCCUAAGGAGGGGgugccagcccauggucagcuaacugguaccugcuccugguucuuggcgaggguacgccuccagacccg
.(((.(((....))).))).(.(((((..(((..(((((.(((((((((...............))))))))).)))))))).))))).).((((.(.......))))).

Structure

agccccggugagccgaggca A     UU   UA     G         cccaug 
                    c CCAGG  GCC  AGGAG GGgugccag      g
                    | |||||  |||  ||||| |||||||||      u
                    g gguuc  ugg  uccuc uccaugguc      c
gcccagaccuccgcauggga c     -u   --     g         aaucga 

Annotation confidence Low

Genome context

chrZ: 48684570-48684679 [+]

Mature gga-miR-6651-5p

• Accession: MIMAT0025751
• Description: Gallus gallus gga-miR-6651-5p mature miRNA
• Sequence: 22 - ACCAGGUUGCCUAAGGAGGGG - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227