Stem-loop gga-mir-6647

Accession

MI0022465

Description

Gallus gallus gga-mir-6647 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

agugcuugcccuggcugcugcgcucCGCUCUGGCCAUGUGACGCAGCUguaaauucaaguagcugcuugcauuaccaguggggcacagcacagccagcacgcaggcgagc
..(((((((.((((((((((.((((((((..((..((((((.((((((((........))))))))))))))..)))))))))).))))..))))))...)))))))...

Structure

-ag       --c      --    c        CU  CC      C        aaa 
   ugcuugc   cuggcu  gcug gcucCGCU  GG  AUGUGA GCAGCUgu   u
   |||||||   ||||||  |||| ||||||||  ||  |||||| ||||||||    
   gcggacg   gaccga  cgac cgggguga  cc  uacguu cgucgaug   u
cga       cac      ca    a        --  au      -        aac 

Annotation confidence Low

Genome context

chr8: 19872411-19872520 [-]

Mature gga-miR-6647-5p

• Accession: MIMAT0025744
• Description: Gallus gallus gga-miR-6647-5p mature miRNA
• Sequence: 26 - CGCUCUGGCCAUGUGACGCAGCU - 48
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227