Stem-loop gga-mir-6639

Accession

MI0022458

Description

Gallus gallus gga-mir-6639 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

uggaugacgguagaaaaagacaaauuauUACAGAACUUCGGCAUGAUUGCUgaguuuaaauagguaaagcugucugcugugucuguagguuguaacuuuuuggacuauga
........(((..((((((((((.....((((((....(((((.(((.(((................))).))))))))..))))))..))))..))))))..)))....

Structure

uggaugac   ag      --    auuau      ACUU     U   U   gaguuua 
        ggu  aaaaag  acaa     UACAGA    CGGCA GAU GCU       a
        |||  ||||||  ||||     ||||||    ||||| ||| |||        
        uca  uuuuuc  uguu     augucu    gucgu cug cga       a
----agua   gg      aa    ---gg      --gu     -   u   aauggau 

Annotation confidence Not enough data

Genome context

chr19: 8696086-8696195 [-]

Mature gga-miR-6639-5p

• Accession: MIMAT0025735
• Description: Gallus gallus gga-miR-6639-5p mature miRNA
• Sequence: 29 - UACAGAACUUCGGCAUGAUUGCU - 51
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227