Stem-loop gga-mir-6637-1

Accession

MI0022456

Description

Gallus gallus gga-mir-6637-1 precursor miRNA

Sequence

cggcgugugggugugagagaggaaggcagcgaaggcugcagggcggucaggcggaggaagccGCUGGGCUGUGCCUGCAAUCGGUgcguugccccuuuaauugugucccc
........(((......(((((..(((((((..((.((((((((((((.(((((......))))).)))))).)))))).))....))))))))))))........))).

Structure

cggcgugu   --ugugag     aa       --aa  c      -      a     ag 
        ggg        agagg  ggcagcg    gg ugcagg gcgguc ggcgg  g
        |||        |||||  |||||||    || |||||| |||||| |||||   
        ccc        uuucc  ccguugc    CU ACGUCC UGUCGG UCGcc  a
-------c   uguguuaa     --       gUGG  A      G      G     ga 

Annotation confidence Low

Genome context

chr23: 5225417-5225526 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-6637-1

Mature gga-miR-6637-3p

• Accession: MIMAT0025733
• Description: Gallus gallus gga-miR-6637-3p mature miRNA
• Sequence: 63 - GCUGGGCUGUGCCUGCAAUCGGU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227