Stem-loop gga-mir-6635-1

Accession

MI0022454

Description

Gallus gallus gga-mir-6635-1 precursor miRNA

Sequence

ccucucuugauguccggcuGUGAAGGAUCAGAACAGCGUGCUUggcugaagugcugugcuguuugucuucgcuguuguguggcagaaugcuucuugggugcuugggagca
..........((((((((.(((((((..(((.(((((..((((.....))))))))).)))....))))))).))))...))))...(((((((.((...)).)))))))

Structure

----------------ccucucuuga    ---    u       --AU   A     GU    g 
                          uguc   cggc GUGAAGG    CAG ACAGC  GCUU g
                          ||||   |||| |||||||    ||| |||||  |||| c
                          acgg   guug cgcuucu    guc ugucg  ugaa u
acgaggguucguggguucuucguaag    ugu    u       guuu   g     --    g 

Annotation confidence Low

Genome context

chr15: 6975427-6975536 [+]

Mature gga-miR-6635-5p

• Accession: MIMAT0025731
• Description: Gallus gallus gga-miR-6635-5p mature miRNA
• Sequence: 20 - GUGAAGGAUCAGAACAGCGUGCUU - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227