Stem-loop gga-mir-6632

Accession

MI0022451

Description

Gallus gallus gga-mir-6632 precursor miRNA

Sequence

uaaccuggagguagcugaaAGAGAUGAGAGGAGUGGAUGACAGCuggagagaggucauucucuagcuccaacaucagucucccguaucuuuucaauccuguuucucuuug
......(((((.(((.((((((((((.(.((((..((((..(((((((((........)))))))))....))))...))))).))))))))...))..))))))))...

Structure

uaaccu     u   -u  ---        A A    -UG    --AC         gag 
      ggagg agc  ga   aAGAGAUG G GGAG   GAUG    AGCuggaga   g
      ||||| |||  ||   |||||||| | ||||   ||||    |||||||||    
      ucucu uug  cu   uuuucuau c ccuc   cuac    ucgaucucu   u
---guu     -   uc  aac        g -    uga    aacc         uac 

Annotation confidence Low

Genome context

chr4: 45143209-45143318 [+]

Mature gga-miR-6632-5p

• Accession: MIMAT0025728
• Description: Gallus gallus gga-miR-6632-5p mature miRNA
• Sequence: 20 - AGAGAUGAGAGGAGUGGAUGACAGC - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227