Stem-loop gga-mir-6631

Accession

MI0022450

Description

Gallus gallus gga-mir-6631 precursor miRNA

Literature search

1 open access papers mention gga-mir-6631
(3 sentences)

Sequence

54 reads, 1 reads per million, 5 experiments

gaaaauugaagagcugguggGAAGAGAAUGCUGUGGUUCUGCugaggaccugugggccccacagcucucucuccucuuuagcuuucugcaucucaguauguuuguuacuc
....(((((((((((((.(((.(((((..(((((((.(((((.........)))))..)))))))..))))).))).)))))))).......))))).............

Structure

---------gaaa     -------        u   A     AU       -U     uga 
             auuga       agagcugg ggG AGAGA  GCUGUGG  UCUGC   g
             |||||       |||||||| ||| |||||  |||||||  |||||   g
             ugacu       uuucgauu cuc ucucu  cgacacc  gggug   a
cucauuguuugua     cuacguc        u   c     cu       cc     ucc 

Annotation confidence Low

Genome context

chr3: 12516662-12516771 [+]

Mature gga-miR-6631-5p

• Accession: MIMAT0025727
• Description: Gallus gallus gga-miR-6631-5p mature miRNA
• Sequence: 21 - GAAGAGAAUGCUGUGGUUCUGC - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227