Stem-loop gga-mir-6630

Accession

MI0022449

Description

Gallus gallus gga-mir-6630 precursor miRNA

Sequence

cggagcuauguaaaaguagaagcgagguacucaggaaggucagagguagugcagggaggaaacagccucCUGCACAAACCGAAGGCUUUUUguuucucauaccucuuucu
.................(((((.((((((....((((((((...(((.(((((((.(((......))))))))))..)))...))))))))........)))))))))))

Structure

cggagcuauguaaaagu     c      ----cuca        aga   -a       g   aa 
                 agaag gaggua        ggaagguc   ggu  gugcagg agg  a
                 ||||| ||||||        ||||||||   |||  ||||||| |||   
                 ucuuu cuccau        UUUUUCGG   CCA  CACGUCc ucc  c
-----------------     -      acucuuug        AAG   AA       -   ga 

Annotation confidence Low

Genome context

chr2: 129537724-129537833 [-]

Mature gga-miR-6630-3p

• Accession: MIMAT0025726
• Description: Gallus gallus gga-miR-6630-3p mature miRNA
• Sequence: 70 - CUGCACAAACCGAAGGCUUUUU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227