Stem-loop gga-mir-6628

Accession

MI0022447

Description

Gallus gallus gga-mir-6628 precursor miRNA

Sequence

ucccuccuguaucuacguaaugguuugggcaaagccuggguccgacuuugugcuauggggaagacagagCAGAAGUCGUGGCCUGGCACAugccuagcaccaggcaauuc
................((..(((((((((((..(((.((((((((((((.((((.((.......)).))))))))))).))))))))...))))))).)))).)).....

Structure

ucccuccuguaucuac  aa    -       -aa   u     -       g    a  gg 
                gu  uggu uugggca   gcc ggguc cgacuuu ugcu ug  g
                ||  |||| |||||||   ||| ||||| ||||||| |||| ||  a
                cg  acca gauccgu   CGG UCCGG GCUGAAG ACga ac  a
-----------cuuaa  -g    c       ACA   -     U       -    g  ag 

Annotation confidence Low

Genome context

chr2: 12131149-12131258 [-]

Mature gga-miR-6628-3p

• Accession: MIMAT0025724
• Description: Gallus gallus gga-miR-6628-3p mature miRNA
• Sequence: 70 - CAGAAGUCGUGGCCUGGCACA - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227