Stem-loop gga-mir-6626

Accession

MI0022445

Description

Gallus gallus gga-mir-6626 precursor miRNA

Sequence

4 reads, 0 reads per million, 2 experiments

cuguagcccgcauaaagcaaagugcuaAGGAGAGAGAAGGGUUGCUguacucaagccugcuuuccuuucucccuccaggcuaguagugaguucuuuagaagcgcuggaaa
...(((((.((.....))...).)))).((((((((.(((((.(((.......)))..))))).)))))))).((((((((..(((........)))..))).)))))..

Structure

----------cuguagcccgcauaaagcaaagugcuaA        A     -U   gu 
                                      GGAGAGAG AGGGU  GCU  a
                                      |||||||| |||||  |||  c
                                      ccucuuuc uuucg  cga  u
aaaggucgcgaagauuucuugagugaugaucggaccuc        c     uc   ac 

Annotation confidence Low

Genome context

chr21: 4626344-4626453 [-]

Mature gga-miR-6626-5p

• Accession: MIMAT0025722
• Description: Gallus gallus gga-miR-6626-5p mature miRNA
• Sequence: 28 - AGGAGAGAGAAGGGUUGCU - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227