Stem-loop gga-mir-6623

Accession

MI0022442

Description

Gallus gallus gga-mir-6623 precursor miRNA

Sequence

augauguaucugcugguuugagcuagaaaagcugauccuucagcucagugauaaaucacuuccauucACAGCUGGAGACCAUCUUUUCAagcccagauuggcuuaucuuc
...........(((((((((.(((.((((((.((.((.(((((((..((((..............))))))))))))).)).)))))).))).)))))))))........

Structure

augauguaucu         a   a      c  a  c       ca    uaaauc 
           gcugguuug gcu gaaaag ug uc uucagcu  guga      a
           ||||||||| ||| |||||| || || |||||||  ||||       
           cgguuagac cga CUUUUC AC AG AGGUCGA  CAcu      c
---cuucuauu         c   A      U  C  -       --    uaccuu 

Annotation confidence Low

Genome context

chr8: 24695552-24695661 [-]

Mature gga-miR-6623-3p

• Accession: MIMAT0025719
• Description: Gallus gallus gga-miR-6623-3p mature miRNA
• Sequence: 68 - ACAGCUGGAGACCAUCUUUUCA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227