Stem-loop gga-mir-6618

Accession

MI0022437

Description

Gallus gallus gga-mir-6618 precursor miRNA

Sequence

cggcacccaucucccgccgagcagcAGAGGCUGCUGUUCCUCUCCUGccugcaguugccggggacucgcagcagcucucuccuccucgccucccuuacguaagcagcagc
.(((...........)))(((.((.((((((((((((...(((((.((........)).)))))...)))))))).)))).)).))).......................

Structure

-----cggcacccaucucccgcc   c  c    -        UCC     U  cug 
                       gag ag AGAG GCUGCUGU   UCUCC Gc   c
                       ||| || |||| ||||||||   ||||| ||    
                       cuc uc ucuc cgacgacg   agggg cg   a
cgacgacgaaugcauucccuccg   c  c    u        cuc     c  uug 

Annotation confidence Low

Genome context

chr26: 1761691-1761800 [-]

Mature gga-miR-6618-5p

• Accession: MIMAT0025714
• Description: Gallus gallus gga-miR-6618-5p mature miRNA
• Sequence: 26 - AGAGGCUGCUGUUCCUCUCCUG - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227