Stem-loop gga-mir-6612

Accession

MI0022431

Description

Gallus gallus gga-mir-6612 precursor miRNA

Sequence

auguuggugcauacacaucACCACAGGGCACCACCAUGCUGugugugcguucguaucaccaugaggugucacuguguuggugcauacauacaauccugauggggcgccac
....((((((.....(((((.(((((((((((..((((..(((.((((....))))))))))).)))))).))))).)))))...........(((....))))))))).

Structure

augu      ----------------auaca     C     -      AC    CU   u    g 
    uggugc                     caucA CACAG GGCACC  CAUG  Gug gugc u
    ||||||                     ||||| ||||| ||||||  ||||  ||| ||||  
    accgcg                     guggu guguc cugugg  guac  cac uaug u
---c      ggguaguccuaacauacauac     u     a      -a    --   -    c 

Annotation confidence Low

Genome context

Unknown

Mature gga-miR-6612-5p

• Accession: MIMAT0025707
• Description: Gallus gallus gga-miR-6612-5p mature miRNA
• Sequence: 20 - ACCACAGGGCACCACCAUGCUG - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227