Stem-loop gga-mir-6611

Accession

MI0022430

Description

Gallus gallus gga-mir-6611 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

cauuucugcucugguucacaugcuuUGCUGGAUCCAGUGACACUUCAguuuucugcuucaggaagugcugcugaauagagcaggaagugugaaccaacagcagcuagaau
.....(((((.((((((((((..((((((..((.(((((.(((((((((.....)))....)))))).))))).))..))))))..))))))))))..))))).......

Structure

--cauuu     -c          gc      GG  C     A      ----   u 
       cugcu  ugguucacau  uuUGCU  AU CAGUG CACUUC    Agu u
       |||||  ||||||||||  ||||||  || ||||| ||||||    ||| u
       gacga  accaagugug  ggacga  ua gucgu gugaag    ucg c
uaagauc     ca          aa      ga  a     c      gacu   u 

Annotation confidence Low

Genome context

chr9: 12336436-12336545 [-]

Mature gga-miR-6611-5p

• Accession: MIMAT0025706
• Description: Gallus gallus gga-miR-6611-5p mature miRNA
• Sequence: 26 - UGCUGGAUCCAGUGACACUUCA - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227