Stem-loop gga-mir-6610

Accession

MI0022429

Description

Gallus gallus gga-mir-6610 precursor miRNA

Sequence

3 reads, 0 reads per million, 2 experiments

cagcccuggcucucucgcaugucuccuuucugcaucacagugcaaacacugagcacgagcugUGGGUGGCUUUGGAGAUAUGGAuggugcuugggccuugugcguaugca
..((((.(((.((.((.(((((((((...((((.(((((((((.........))....)))))))))))....))))))))))).)).))).))))....(((....)))

Structure

------------ca    u   u  c  g         -uuu    a       ----  aaa 
              gccc ggc cu uc caugucucc    cugc ucacagu    gc   c
              |||| ||| || || |||||||||    |||| |||||||    ||   a
              cggg ucg gg AG GUAUAGAGG    GGUG GGUgucg    cg   c
acguaugcguguuc    u   u  u  -         UUUC    -       agca  agu 

Annotation confidence Low

Genome context

chr2: 4915023-4915132 [+]

Mature gga-miR-6610-3p

• Accession: MIMAT0025705
• Description: Gallus gallus gga-miR-6610-3p mature miRNA
• Sequence: 63 - UGGGUGGCUUUGGAGAUAUGGA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227