Stem-loop gga-mir-6606

Accession

MI0022425

Description

Gallus gallus gga-mir-6606 precursor miRNA

Sequence

ucacagggaagagcaacccagcccggGAGGAGCGGGAGGAGCGGGAggagcgacucuuuuuggccuuugcuucccggccgguggagggcuccccagagcacgucgccuca
.....(((........))).(.((((((..(((((.(((..(((((((((...))))))))).)))))))))))))).)(((((.(.((((....)))).).)))))...

Structure

-----------ucacagggaagagcaaccca c      GG     G   AG         c 
                               g ccggGA  AGCGG AGG  CGGGAggag  
                               | ||||||  ||||| |||  ||||||||| g
                               c ggcccu  ucguu ucc  guuuuucuc  
acuccgcugcacgagaccccucgggaggugg c      --     -   -g         a 

Annotation confidence Low

Genome context

chr1: 76447763-76447872 [-]

Mature gga-miR-6606-5p

• Accession: MIMAT0025700
• Description: Gallus gallus gga-miR-6606-5p mature miRNA
• Sequence: 27 - GAGGAGCGGGAGGAGCGGGA - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227