Stem-loop gga-mir-6605

Accession

MI0022424

Description

Gallus gallus gga-mir-6605 precursor miRNA

Sequence

uacauuacugauauucuuuucugggACUGCAGAGCUUCUUGAACAAGAuagcauaugucagcuuguugagaauuucugcauuccaguuuagccuuuugugcccauauuuu
.....(((.((....((...((((((.(((((((.(((((.((((((...((....))...))))))))))).)))))))))))))...))...)).)))..........

Structure

-----uacau   u  uauu  uuu      C       C     G      Aua  a 
          uac ga    cu   cugggA UGCAGAG UUCUU AACAAG   gc u
          ||| ||    ||   |||||| ||||||| ||||| ||||||   ||  
          gug uu    ga   gaccuu acgucuu aagag uuguuc   ug a
uuuuauaccc   u  -ucc  uuu      -       u     -      gac  u 

Annotation confidence Low

Genome context

chr3: 84548705-84548814 [-]

Mature gga-miR-6605-5p

• Accession: MIMAT0025699
• Description: Gallus gallus gga-miR-6605-5p mature miRNA
• Sequence: 26 - ACUGCAGAGCUUCUUGAACAAGA - 48
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227