Stem-loop gga-mir-6603

Accession

MI0022422

Description

Gallus gallus gga-mir-6603 precursor miRNA

Sequence

3 reads, 2 reads per million, 1 experiments

ggaacuuccugugcuuuaguuuguggcuguuuccccuuguccugucgcugugcaucgcugaAAGGACAAGAGGAAAUGGUUUCAaacuaaaagagaggagauuuagauac
.(((.(((((.(..(((((((((.((((((((((.((((((((.((((........)).)).)))))))).)))))))))).)))))))))..).))))).)))......

Structure

-----g   c     g gc         u          c        g  -  ugu 
      gaa uuccu u  uuuaguuug ggcuguuucc cuuguccu uc gc   g
      ||| ||||| |  ||||||||| |||||||||| |||||||| || ||    
      uuu gagga a  aaaucaaAC UUGGUAAAGG GAACAGGA ag cg   c
cauaga   a     g ga         U          A        A  u  cua 

Annotation confidence Low

Genome context

chr5: 23106648-23106757 [+]

Mature gga-miR-6603-3p

• Accession: MIMAT0025697
• Description: Gallus gallus gga-miR-6603-3p mature miRNA
• Sequence: 62 - AAGGACAAGAGGAAAUGGUUUCA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227