Stem-loop gga-mir-6600

Accession

MI0022419

Description

Gallus gallus gga-mir-6600 precursor miRNA

Sequence

ggccaugcugggauucuggggaaggcaaggcaagugggagccauggcucugcagcugaacagacauguUGCAGUGAGACGGGCUCCCACAUccuccccuucuagaaaugu
..(((...)))..((((..((((((..(((.(.(((((((((....(.(((((((((......)).))))))).).....))))))))).))))..))))))))))....

Structure

ggccaugcuggga    gg      ca   c a         -augg u       -  aa 
             uucu  ggaagg  agg a gugggagcc     c cugcagc ug  c
             ||||  ||||||  ||| | |||||||||     | ||||||| ||   
             aaga  ucuucc  ucc U CACCCUCGG     G GACGUug ac  a
---------ugua    --      cc   - A         GCAGA U       u  ag 

Annotation confidence Low

Genome context

chr2: 5837823-5837932 [-]

Mature gga-miR-6600-3p

• Accession: MIMAT0025694
• Description: Gallus gallus gga-miR-6600-3p mature miRNA
• Sequence: 69 - UGCAGUGAGACGGGCUCCCACAU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227