Stem-loop gga-mir-6598

Accession

MI0022418

Description

Gallus gallus gga-mir-6598 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

ccccuguggcagccucuggcacagcUGCAGCAAGGGAGAAGUCUGCuuuuuacaccauccugguuacugcagagcugcucuuuugcucaggcugugcaggcaaggucgga
......((((.((((...((((((((..((((((((((.(((((((.......((((...))))....))))).)).))))))))))..))))))))))))...))))..

Structure

ccccug    --a    cug        GC          A  -     uuuuuac    u 
      uggc   gccu   gcacagcU  AGCAAGGGAG AG UCUGC       acca  
      ||||   ||||   ||||||||  |||||||||| || |||||       |||| c
      gcug   cgga   cgugucgg  ucguuuucuc uc agacg       uggu  
----ag    gaa    ---        ac          g  g     ---ucau    c 

Annotation confidence Not enough data

Genome context

chr5: 37909792-37909901 [-]

Mature gga-miR-6598-5p

• Accession: MIMAT0025693
• Description: Gallus gallus gga-miR-6598-5p mature miRNA
• Sequence: 26 - UGCAGCAAGGGAGAAGUCUGC - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227