Stem-loop gga-mir-6591

Accession

MI0022411

Description

Gallus gallus gga-mir-6591 precursor miRNA

Sequence

2 reads, 0 reads per million, 2 experiments

cgccuccgucugcgcagccgccgggccgcccugggcggggcccgcuacgcuccucucagcgguaggGCAGCCCGACGGACCGGCUgccgcggggcgggacccucgcucgc
....(((((((.(((.((.(((((.(((...(((((...((((....((((......))))...)))).))))).))).))))).)).))))))))))............

Structure

--------cgcc       g   a  c     g   ccc     ggg    gcua    cc 
            uccgucu cgc gc gccgg ccg   ugggc   gccc    cgcu  u
            ||||||| ||| || ||||| |||   |||||   ||||    ||||   
            gggcggg gcg cg CGGCC GGC   GCCCG   CGgg    gcga  c
cgcucgcuccca       -   c  U     A   --A     --A    -aug    cu 

Annotation confidence Low

Genome context

chr4: 35010474-35010583 [+]

Mature gga-miR-6591-3p

• Accession: MIMAT0025684
• Description: Gallus gallus gga-miR-6591-3p mature miRNA
• Sequence: 67 - GCAGCCCGACGGACCGGCU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227