Stem-loop gga-mir-6589

Accession

MI0022409

Description

Gallus gallus gga-mir-6589 precursor miRNA

Sequence

cccgagaaauguuuugugaagcuucuguUGAUGGAGAUGGUGUGAAGCAGAaguguguuuuuacugcuucugcuaucuucaucuucacaugcucucugacaaaggacugu
.........(.((((((.((((...((..(((((((((((((.((((((((((......))).))))))))))))))))))))..))...)))...).)))))).)....

Structure

cccgagaaa g      g ---   uuc  uU             U       -   ug 
         u uuuugu a   agc   ug  GAUGGAGAUGGUG GAAGCAG Aag  u
         | |||||| |   |||   ||  ||||||||||||| ||||||| |||   
         a gaaaca u   ucg   ac  cuacuucuaucgu cuucguc uuu  g
-----uguc g      g cuc   uac  uu             -       a   uu 

Annotation confidence Not enough data

Genome context

chr11: 11215738-11215847 [-]

Mature gga-miR-6589-5p

• Accession: MIMAT0025681
• Description: Gallus gallus gga-miR-6589-5p mature miRNA
• Sequence: 29 - UGAUGGAGAUGGUGUGAAGCAGA - 51
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227