Stem-loop gga-mir-6588

Accession

MI0022408

Description

Gallus gallus gga-mir-6588 precursor miRNA

Sequence

ggggcugagcagggagcuccugcccucagcugcucuuccacagccugagcugugucaccuccaacacaUUGCUGGGCUGGGGGAAGAGGAUuuucaguucuguuuccuuu
..(((((((((((.....)))))..)))))).(((((((.((((((.((((((((........)))))..)))))))))..)))))))......................

Structure

ggggcugagcagggagcuccugcccucagcug       -a      g   --     cac 
                                cucuucc  cagccu agc  ugugu   c
                                |||||||  |||||| |||  |||||    
                                GAGAAGG  GUCGGG UCG  acaca   u
----------uuuccuuugucuugacuuuUAG       GG      -   UU     acc 

Annotation confidence Low

Genome context

chr13: 17553409-17553518 [-]

Mature gga-miR-6588-3p

• Accession: MIMAT0025680
• Description: Gallus gallus gga-miR-6588-3p mature miRNA
• Sequence: 69 - UUGCUGGGCUGGGGGAAGAGGAU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227