Stem-loop gga-mir-6584

Accession

MI0022404

Description

Gallus gallus gga-mir-6584 precursor miRNA

Sequence

4 reads, 0 reads per million, 3 experiments

gcaaaaaggcaaaggcagcacaccaUCUGGAAGUUCUGCAGAUGAUGAuaccuuuucuucgucaucugcuccaauaacuuucaaagaugugcgagcucaaagaccucuga
......((((...(((.(((((.....((((((((..(((((((((((..........)))))))))))......))))))))....)))))..)))....).)))....

Structure

gcaaaa   - -aaa   -a     ccaUC        ----CU           uacc 
      agg c    ggc  gcaca     UGGAAGUU      GCAGAUGAUGA    u
      ||| |    |||  |||||     ||||||||      |||||||||||     
      ucc g    ucg  cgugu     acuuucaa      cgucuacugcu    u
--aguc   a aaac   ag     -agaa        uaaccu           ucuu 

Annotation confidence Low

Genome context

chr2: 93858571-93858680 [-]

Mature gga-miR-6584-5p

• Accession: MIMAT0025675
• Description: Gallus gallus gga-miR-6584-5p mature miRNA
• Sequence: 26 - UCUGGAAGUUCUGCAGAUGAUGA - 48
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227