Stem-loop gga-mir-6574

Accession

MI0022392

Description

Gallus gallus gga-mir-6574 precursor miRNA

Sequence

aacaugacauuguguccucagagacAUUCCUUGUCUUUUCUGAAGAcugugagagugcugcgcugUGUCUGUAGAAAAGACAGGAUGUcucuggauauccauguacu
.(((((.....((((((..((((((((.(((.((((((((((.((((.(((((....)).)))...)))).))))))))))))))))))))))))))).)))))...

Structure

--a     acauu      uc        U   U          A    --u   -  a 
   acaug     gugucc  agagacAU CCU GUCUUUUCUG AGAc   gug ag g
   |||||     ||||||  |||||||| ||| |||||||||| ||||   ||| ||  
   uguac     uauagg  ucucUGUA GGA CAGAAAAGAU UCUG   cgc uc u
uca     ----c      --        -   -          G    Ugu   g  g 

Annotation confidence Low

Genome context

chr9: 7623645-7623751 [-]

Mature gga-miR-6574-5p

• Accession: MIMAT0025655
• Description: Gallus gallus gga-miR-6574-5p mature miRNA
• Sequence: 26 - AUUCCUUGUCUUUUCUGAAGA - 46
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6574-3p

• Accession: MIMAT0025656
• Description: Gallus gallus gga-miR-6574-3p mature miRNA
• Sequence: 66 - UGUCUGUAGAAAAGACAGGAUGU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227