Stem-loop gga-mir-6571

Accession

MI0022389

Description

Gallus gallus gga-mir-6571 precursor miRNA

Sequence

ucauuuguuggcuugagguuGUAAAGCUGUUUGGAUCUUCAGggaaauuggcaacacUGAGAGACCACAUACAGCUUUGAAAaccuaauugcugaaauauucugcc
.......(((((...(((((.(((((((((.(((.(((((((..............)))).))))))...)))))))))..)))))....)))))...........

Structure

----ucauuug     -uug     -G         --U   A   -    ggaaau 
           uuggc    agguu  UAAAGCUGU   UGG UCU UCAG      u
           |||||    |||||  |||||||||   ||| ||| ||||       
           agucg    uccaA  GUUUCGACA   ACC AGA AGUc      g
ccgucuuauaa     uuaa     AA         UAC   -   G    acaacg 

Annotation confidence Low

Genome context

chr2: 64574423-64574528 [+]

Mature gga-miR-6571-5p

• Accession: MIMAT0025649
• Description: Gallus gallus gga-miR-6571-5p mature miRNA
• Sequence: 21 - GUAAAGCUGUUUGGAUCUUCAG - 42
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6571-3p

• Accession: MIMAT0025650
• Description: Gallus gallus gga-miR-6571-3p mature miRNA
• Sequence: 58 - UGAGAGACCACAUACAGCUUUGAAA - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227