Stem-loop gga-mir-6569

Accession

MI0022387

Description

Gallus gallus gga-mir-6569 precursor miRNA

Sequence

10 reads, 1 reads per million, 4 experiments

gaggccuggggcacucgcgGCCCUGUUGGACUAACGGCGUUGcuguucugcaguaaCUUGAGUUACGGACUGGGGUUGGagccgccuuuucuggguuagaggau
..((((((((((.(((.((((((((((.(..((((...((((((((...))))))))....))))).))).))))))))))..)))....))))))).......

Structure

-----ga       ----   -a   g       -   G AC    -GGC        u 
       ggccugg    ggc  cuc cgGCCCU GUU G  UAAC    GUUGcugu  
       |||||||    |||  ||| ||||||| ||| |  ||||    |||||||| c
       uuggguc    ccg  gaG GUUGGGG CAG C  AUUG    Caaugacg  
uaggaga       uuuu   cc   -       U   G --    AGUU        u 

Annotation confidence Low

Genome context

chr13: 4700575-4700678 [+]

Mature gga-miR-6569-5p

• Accession: MIMAT0025645
• Description: Gallus gallus gga-miR-6569-5p mature miRNA
• Sequence: 20 - GCCCUGUUGGACUAACGGCGUUG - 42
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6569-3p

• Accession: MIMAT0025646
• Description: Gallus gallus gga-miR-6569-3p mature miRNA
• Sequence: 57 - CUUGAGUUACGGACUGGGGUUGG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227