Stem-loop gga-mir-6567

Accession

MI0022384

Description

Gallus gallus gga-mir-6567 precursor miRNA

Sequence

3 reads, 0 reads per million, 2 experiments

ccggcuccgcauccagccccggggcAGCUCCGAACUCGCGGUGCCCGcggaaggcgcucggccggcgGGCAGCGCGGAGCGGAGCUUUggcgucuccaucccuuucc
...((((((..........))))))(((((((..(.((((.(((((((....(((.....))).))))))).)))))..))))))).(((.....))).........

Structure

ccggcuccgcauccagccccggggc       AA U    G       ggaa   g 
                         AGCUCCG  C CGCG UGCCCGc    ggc c
                         |||||||  | |||| |||||||    ||| u
                         UCGAGGC  G GCGC ACGGgcg    ccg c
----ccuuucccuaccucugcggUU       GA -    G       ---g   g 

Annotation confidence Low

Genome context

chr20: 8632751-8632857 [-]

Mature gga-miR-6567-5p

• Accession: MIMAT0025639
• Description: Gallus gallus gga-miR-6567-5p mature miRNA
• Sequence: 26 - AGCUCCGAACUCGCGGUGCCCG - 47
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6567-3p

• Accession: MIMAT0025640
• Description: Gallus gallus gga-miR-6567-3p mature miRNA
• Sequence: 68 - GGCAGCGCGGAGCGGAGCUUU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227