Stem-loop gga-mir-3064

Accession

MI0022380

Description

Gallus gallus gga-mir-3064 precursor miRNA

Literature search

1 open access papers mention gga-mir-3064
(2 sentences)

Sequence

4 reads, 0 reads per million, 2 experiments

acuauugucuaacguuuaucuucgauuUGGCUGUUGUGGUGUGCAAAAcuuuguaccuugcuuuUUGCCACACUGCAACACUUUACAgauguggaagaugugaaauuugucaucaauuaugacu
................(((((((.(((((..(((((((((((((((((..............))))).)))))))))))).....)))))...)))))))........(((((.....))))).

Structure

--------acuauugucuaacguu       --g     ---GC            -     cuuugu 
                        uaucuuc   auuUG     UGUUGUGGUGUG CAAAA      a
                        |||||||   |||||     |||||||||||| |||||       
                        guagaag   uagAC     ACAACGUCACAC GUUuu      c
ucaguauuaacuacuguuuaaagu       gug     AUUUC            C     ucguuc 

Annotation confidence Low

Genome context

chr18: 6961443-6961566 [-]

Mature gga-miR-3064-5p

• Accession: MIMAT0025631
• Description: Gallus gallus gga-miR-3064-5p mature miRNA
• Sequence: 28 - UGGCUGUUGUGGUGUGCAAAA - 48
• Evidence: experimental ; Illumina [1]

Mature gga-miR-3064-3p

• Accession: MIMAT0025632
• Description: Gallus gallus gga-miR-3064-3p mature miRNA
• Sequence: 65 - UUGCCACACUGCAACACUUUACA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227