Stem-loop gga-mir-6560

Accession

MI0022378

Description

Gallus gallus gga-mir-6560 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

ccacaaugcagucugaggcuggugaUGUGUUGCUCCAUACUGUGGUCUgucuguacuuccacugcaUACCAGGAUGGACCGCUGCACACCaacagcgcagacaaauggcc
..........(((((..((((.((.(((((.(((((((.((.((((.(((..((......)).))).)))))))))))..)).))))).)).)))).)))))........

Structure

ccacaaugca     ag    g  a     U  --     A  G    C   cu  ac 
          gucug  gcug ug UGUGU GC  UCCAU CU UGGU Ugu  gu  u
          |||||  |||| || ||||| ||  ||||| || |||| |||  ||   
          cagac  cgac aC ACACG CG  AGGUA GG ACCA acg  ca  u
--ccgguaaa     -g    a  C     U  CC     -  -    U   -u  cc 

Annotation confidence Low

Genome context

Unknown

Mature gga-miR-6560-5p

• Accession: MIMAT0025627
• Description: Gallus gallus gga-miR-6560-5p mature miRNA
• Sequence: 26 - UGUGUUGCUCCAUACUGUGGUCU - 48
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6560-3p

• Accession: MIMAT0025628
• Description: Gallus gallus gga-miR-6560-3p mature miRNA
• Sequence: 67 - UACCAGGAUGGACCGCUGCACACC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227