Stem-loop bta-mir-411b

Accession

MI0022288

Description

Bos taurus bta-mir-411b precursor miRNA

Literature search

4 open access papers mention bta-mir-411b
(7 sentences)

Sequence

61331 reads, 39.0 reads per million, 211 experiments

uguggagagaUGGUCGACCAUAAAACGUACGUgugcuuuaugacgUAUGUCACAUGGUCCACUAAUucucagcau
(((.(((((.((((.((((((...((((((((..........))))))))...)))))).)))).))))).))).

Structure

-   g     a    C      AAA        gugc 
 ugu gagag UGGU GACCAU   ACGUACGU    u
 ||| ||||| |||| ||||||   ||||||||     
 acg cucuU AUCA CUGGUA   UGUAUgca    u
u   a     A    C      CAC        guau 

Annotation confidence High

Genome context

21: 65915594-65915668 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from bta-mir-411b

Mature bta-miR-411b-5p

• Accession: MIMAT0025541
• Description: Bos taurus bta-miR-411b-5p mature miRNA
• Sequence: 11 - UGGUCGACCAUAAAACGUACGU - 32
• Evidence: experimental ; Illumina [1]

Mature bta-miR-411b-3p

• Accession: MIMAT0051003
• Description: Bos taurus bta-miR-411b-3p mature miRNA
• Sequence: 46 - UAUGUCACAUGGUCCACUAAU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026