miRBase entry: hex-MIR390b

Stem-loop hex-MIR390b


Accession
MI0022250
Description
Helianthus exilis hex-MIR390b precursor miRNA


Sequence

uaaacagcauaagaagaauAAGCUCAGGAGGGAUAGCGCCaugauuguuaucgaaagguuggcaaguguugcuucauucggccaucauauugaaccagauuguauaggaguaucaa
...............................((((.(.((((((((....((((...(.((((.((((......))))..)))).)...))))....))))))...)).)))))..

Structure
uaaacagcauaagaagaauAAGCUCAGGAGG    G G  ---      guua    aag u    -a    uu 
                               GAUA C CC   augauu    ucga   g uggc  agug  g
                               |||| | ||   ||||||    ||||   | ||||  ||||   
                               cuau g gg   uguuag    aguu   c accg  uuac  c
-----------------------------aa    - a  aua      acca    aua u    gc    uu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hex-miR390b

Accession MIMAT0025510
Description Helianthus exilis hex-miR390b mature miRNA
Sequence 20 - AAGCUCAGGAGGGAUAGCGCC - 40
Evidence not_experimental

References

  1. PubMed ID: 21670966
    Identification of MicroRNAs and their targets in Helianthus
    "Barozai MY, Baloch IA, Din M"
    "Mol Biol Rep (2012) 39:2523-2532