Accession
MI0022078
Description
Pseudorabies virus
prv-mir-LLT7 precursor miRNA
Sequence
uggccgcccccgggggguugaugGGGAUGGGCGCUCGGGGGUGAucgucugcuaccaaaccgcACCACCGUCCCCCUGUCCCUcauccacuucucgacggccggcuc
.(((((((..((((((((.((((((((((((.(..(((.((((...((.((....)).))..)))).)))..).)))))))).)))).))))))))..)).))))).
.(((((((..((((((((.((((((((((((.(..(((.((((...((.((....)).))..)))).)))..).)))))))).)))).))))))))..)).))))).
Structure
u - cc u - C CU G Auc c c ggccg cc cggggggu gaug GGGAUGGG G CGG GGUG gu ug u ||||| || |||||||| |||| |||||||| | ||| |||| || || ucggc gg gcucuuca cuac CCCUGUCC C GCC CCAc ca ac a c c ca c U C CU A -gc a c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
NC_006151.1: 99279-99385 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from prv-mir-LLT7
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature prv-miR-LLT7-5p
| Accession | MIMAT0025310 |
| Description | Pseudorabies virus prv-miR-LLT7-5p mature miRNA |
| Sequence | 24 - GGGAUGGGCGCUCGGGGGUGA - 44 |
| Evidence |
experimental
Ion-Torrent [2] |
Mature prv-miR-LLT7-3p
| Accession | MIMAT0037460 |
| Description | Pseudorabies virus prv-miR-LLT7-3p mature miRNA |
| Sequence | 64 - ACCACCGUCCCCCUGUCCCU - 83 |
| Evidence |
experimental
Illumina [1], Ion-Torrent [2] |
References
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